Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6964170 chr7:140165708 T/C LOC441455 chr9:99488103-99489749:+ 0.48 6.45 2.76E-10 Box Plot
THCA rs6965942 chr7:33071205 A/T FKBP9L chr7:55748767-55780945:- 0.41 7.62 1.36E-13 Box Plot
THCA rs6966049 chr7:140160914 T/C LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs6966056 chr7:140160926 T/A LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs6966930 chr7:140174091 C/A LOC441455 chr9:99488103-99489749:+ 0.48 6.35 5.1E-10 Box Plot
THCA rs6968519 chr7:33076485 A/G FKBP9L chr7:55748767-55780945:- 0.35 7.4 6.37E-13 Box Plot
THCA rs6968931 chr7:140134456 C/T LOC441455 chr9:99488103-99489749:+ 0.52 6.89 1.78E-11 Box Plot
THCA rs6973069 chr7:140120136 G/A LOC441455 chr9:99488103-99489749:+ 0.5 6.26 8.53E-10 Box Plot
THCA rs6974138 chr7:75063487 C/G TRIM74 chr7:72430016-72439997:- 0.42 7.39 6.42E-13 Box Plot
THCA rs6975307 chr7:140140296 T/C LOC441455 chr9:99488103-99489749:+ 0.51 6.71 5.36E-11 Box Plot
THCA rs6978946 chr7:33126331 A/C FKBP9L chr7:55748767-55780945:- 0.37 6.72 5.12E-11 Box Plot
THCA rs6980481 chr8:11244841 G/A SGK223 chr8:8175258-8244008:- 0.42 7.55 2.18E-13 Box Plot
THCA rs6980856 chr8:10938260 A/G SGK223 chr8:8175258-8244008:- -0.48 -9.26 7.19E-19 Box Plot
THCA rs6981201 chr8:10968550 G/C SGK223 chr8:8175258-8244008:- 0.43 8.03 7.47E-15 Box Plot
THCA rs6981303 chr8:3258411 G/T CSMD1 chr8:2792875-4852494:- -0.33 -6.15 1.68E-9 Box Plot